CHAPTER 15:  CHROMOSOMAL BASIS OF INHERITANCE
 

IMPORTANT TIMELINE IN GENETICS & CYTOLOGY

1860’s: Mendel proposes inherited factors segregate & assort independently

1875-90: Cytologists work out processes of mitosis, meiosis

1900: Mendel’s principles of Segregation & Independent Assortment rediscovered

1902: Chromosomal Theory of Inheritance developed, links Mendelian genetics with chromosomal movements during meiosis

1910: Morgan discovers evidence that genes are located on chromosomes
 

Chromosome Theory of Inheritance
Tenets of Theory:
1. Mendelian factors (genes) are located on chromosomes

2.  Genes segregate when homologous chromosomes separate during meiosis

3. Genes independently assort due to behavior of chromosomes during meiosis

Thomas Hunt Morgan traced gene to a specific chromosome during work on genetics of fruit flies (Drosophila melanogastor)
 

Morgan traced a gene to a specific chromosome in flies … why fruit flies ?

Fruit fly (Drosophila melanogaster) characteristics:
    - easily cultured in lab, prolific breeders
    - have short generation time
    - have only 4 pairs of chromosomes which are readily visible with a microscope

These characteristics allowed for cycling through many experiments rapidly
 

Autosomes & sex chromosomes

Fruit flies have 4 pairs of chromosomes made up of: 3 pairs autosomes, 1 pair sex-determining    chromosomes

Autosomes - any of the paired chromosomes other than sex-determining X & Y chromosomes

In flies X & Y allele combinations determine sex:
    2 XX sex chromosomes = females
    XY sex chromosomes = males

Morgan bred millions of flies in his “Fly Room” looking for those with new character traits or “mutants”

Morgan’s experiments followed mutant traits in genetic crosses

Morgan’s approach similar to Mendel’s, except Morgan tracked mutant phenotypic traits in crosses

Mutant phenotypes = phenotypes that are alternatives to the “wild type” & due to mutations in wild-type gene
- wild types are normal & most common trait in popl’n
 

Types of Mutant Flies
 

Morgan's conventions on notation

1. Genes symbol based on 1st mutant observed (non wild-type)
2. If mutant recessive, 1st letter lowercase (w = white eye) 
3. If mutant dominant, 1st letter uppercase: Cy = curled wings
4.  Wild-type designated by superscript + over symbol for trait:
     w+ = flies with normal red eyes
     vg+ = normal sized wings not vestigial in shape
     Cy+ = allele for normal or straight wings not curled
 
 

Fig. 14.2. Morgan's 1st mutant in fruit flies

            Red-eyed & white-eyed flies
 

Morgan's monohybrid cross; eye color in fruit flies

P:  Red-eye females (XX)  X  white-eyed male (XY)
 
F1 Ratio:   All flies had red-eyes with approximate
                 equal numbers of females & males (50:50)
 
F2 Ratio:       3 red-eyes: 1 white-eye

Well, this seems normal enough but there was an important twist: all white-eyed flies were males
           all red-eyed flies were females

Morgan's sex-linked gene deduction

1. Gene for eye color located on X chromosome, no corresponding allele for eye color on Y chromosome

2. If eye color is located only on X chromosome, then females (XX) have 2 copies of gene while males have only 1 (XY)

3. Mutant allele recessive, white-eyed female must have allele on both X chromosomes (impossible for F2 females)

4. White-eyed male has no wild-type allele to mask recessive mutant, single copy of mutant allele confers white eyes

… let’s look at this using Punnet squares to be sure!
 

Wild type female (Xw+ Xw+)  X mutant  males (Xw Y)
 
 
 

Red-eye female (Xw+ Xw)  X red-eye males (Xw Y)
 
 
 
 

Discovery of a sex-linked gene:
Cross of white-eyed male X red-eyed female

P generation         w+ w+         X             w
                red-eyed female            white-eye male

F1 generation         w+w          X             w +
                    red-eyed female         red-eye male

F2 generation:   1/4 w+w+ red-eyed female     1/4 w w + red-eyed female
                       1/4 w+ red-eyed male             1/4 w white-eye male

3:1 phenotypic ratio but white-eyed trait only in males
 

Sex-linkage & linked genes

Sex-linked genes = genes located on sex chromosomes (usually applied to genes on the X
    chromosome)

Linked genes = genes that are located on the same chromosome and that tend to be inherited
    together

Morgan's dihybrid testcrosses revealed linked genes and more...
 

Morgan’s dihybrid testcross experiments revealed linked autosomal genes

Hypotheses:
1. If genes are on different chromosomes they should assort independently during meiosis

2. If genes are on same chromosome they should assort together during meiosis

Morgan’s Dihybrid Testcross experiment:
Crossed flies heterozygous for body color (gray or black) and wing shape (normal or vestigial) with flies that were homozygous recessive (black with vestigial wings)

Dihybrid testcross for flies varying in color & wing shape
1. Dihybrid genotypes:   b+b vg+vg  X  bbvgvg (double recessive)
   b+    = wild-type gray bodies        b  = mutant black bodies
    vg+  = wild-type normal wings    vg  = mutant vestigial wings

2. Testcross to double recessives: bbvgvg = what phenotype?

3.  If assort independently, in dihybrid testcross expect 1:1:1:1 phenotype ratios
 

FLY TESTCROSS DIAGRAM
 
 

Dihybrid testcross:  results not 1:1:1:1
 
 

Morgan’s Dihybrid Testcross Summary

                                             Phenotypes Resulting From Cross
Expected by:            Gray-normal    Black-vestig  Gray vestig   Black-normal
Independent                       575              575               575                 575
assortment

Linkage                            1,150             1,150               0                     0

Observed                           965                944             206                 185

1. Results definitely didn’t fit for Independent Assortment but were close
      to that expected due to linkage
2. Morgan’s conclusion: genes were linked, but linkage was incomplete
     due to mechanism that occasionally
3. At the time it was not known that crossing over occurred & produced genetic recombination,
    eventually was shown that Morgan was correct
 

Genetic recombination results from independ. assortment & crossing over

Genetic recombination = production of offspring with new combinations of traits apart from
    those found in parents

Parental types = progeny having same phenotypes of one or other parent

Recombinants = progeny whose phenotypes differ from either parent
 

How genetic recombination occurs differs for unlinked & linked genes

1. Recombination of unlinked genes occurs by independent assortment of chromosomes
    Ex. Mendel’s dihybrid testcross:
  YyRr (yellow-round) X  yyrr (green-wrinkled)

Progeny:  yellow-round (50%), green-wrinkled (50%)= parental type
                 green-round (50%), yellow-wrinkled (50%)= recombinants

2. Recombination of linked genes occurs by “crossing over” during meiosis
   Ex. Recombinant phenotypes in Morgan’s flies ...
 
 
 

Dihybrid testcross with Drosophila varying in body color & wing shape
Body color: Gray (b+), Black (b)
Wing shape: Normal (vg+), Vestigial (vg)
 

Figure: Dihybrid testcross with flies

Figure 14.5a & b: Recombination due to crossing over
 

Recombination frequencies can be calculated from phenotypes of offspring

Points on Recombination for Linked genes:
1. Linkage seldom complete; genes that are close together are
       more tightly linked than those far apart…why??
2. Linked genes that are far apart may assort independently
     Ex: Genes for seed color & flower color in peas are now known to
     be on same chromosome.  They are so far apart, however, Mendel
     observed independent assortment…
 

 Recombination data can be used to map genetic loci

Recombination frequencies vary for genes on the same chromosome: some genes more tightly linked than others

Sturtevant suggested that if crossing over were random, the probability of crossing over is proportional to distance between genes
    - gene pairs with higher recombination frequencies are farther
       apart than those with lower recombination frequencies

A linkage map gives information on the relative positions of genes on chromosomes
 - one map unit is equal to 1% recombination frequency
 

Recombination frequencies for 3 genes on Chromosome II in flies

Body color (b) & wing type (vg) = 17%
Body color (b) & eye color (cn) = 9%
Eye color (cn) & wing type (vg) = 9.5%
 

Chromosomal basis of sex

Heterogametic sex = sex that produces 2 kinds of gametes and determines the sex of the
    offspring
Homogametic sex = sex that produces one kind of gamete
Hemizygous = condition where only 1 copy of gene present in diploid organism
 

Figure: Human chromosomes: 22 homologous pairs, 1 pair sex chromosomes

Figures 14.8a-d: Some chromosomal systems of sex determination

Sex-linked disorders in humans

1. Fathers pass X-linked alleles to daughters only

2. Females pass X-linked alleles to sons & daughters

3. Sex-linked disorders much more common in males
    - males are hemizygous, so if get mutant allele from  mothers
       it is expressed
    - females only have diseases if homozygous (usually recessive)
 

Figure 14.9: The transmission of sex-linked recessive traits
 

Genetic disorders can arise from altered chromosome numbers or structure
Meiotic errors and mutagens  can alter the structure or  numbers of chromosomes

Meiotic errors include:
1. Nondisjunction of homologous chromosomes or sister chromatids

2. Breakage & Crossing over errors:  Deletions, duplications, inversions, translocations

Nondisjunction errors during Meiosis i
 
 

Nondisjunction errors during Meiosis II
 
 

Unusual chromosome number conditions: aneuploidy & polyploidy
Polyploidy = chromosome number that is more than 2 complete chromosome sets (3n, 4n, etc)
- Polyploidy condition rare in animals but relatively common  in plants

Aneuploidy = condition of having an abnormal number of certain chromosomes in somatic cells (trisomy, monosomy)
 
Aneuploid condition causes characteristic symptoms or “syndromes” in human survivors
 Example = Down’s syndrome
 

Alteration of chromosome structure can result from:
1. Physical breakage
2. Crossing-over errors
Figure 14.12: Alterations of chromosomes
 

Other aneuploidy problems
Trisomy 13 - Patau syndrome
Trisomy 18 - Edwards syndrome

Sex chromosome aneuploidies are less severe
- Y chromosomes have few genes
- X-inactivation occurs in female mammals (Barr bodies Fig. 15.10)
 

X-Inactivation in Female Mammals
Female calico cats:  X chromosome inactivation influences coat color
- allele on one X chromosome for black, other X has allele for orange
- patchwork of orange, black pelage results from inactivation of one  or other of these X chromosomes during early development
 

Extranuclear genes & non-Mendelian inheritance in eukaryotes
Extranuclear circular genes are found in cytoplasmic organelles
 (chloroplasts, mitochondria)

Cytoplasmic genes of these organelles are not inherited in Mendelian fashion as are genes on nuclear chromosomes

Genes on chloroplasts & mitochondria maternally inherited with cytoplasm
1. In most eukaryotes eggs contain large amounts of cytoplasm but sperm or pollen does not
2. Mitochondria & chloroplasts in zygotes come only from female egg so DNA of these is inherited with cytoplasm